#Metabarcoding

With @altermatt_lab and @CoutonMarjorie , we synthesize all possible problems inherent to DNA reference databases and discuss possible solutions in this new article in @molecology #metabarcoding #eDNA

Working hard to help bringing you the best eDNA #metabarcoding workshop out there, together with @MatSeymour @EdnaEecology @GuibertIsis @Matt_Leray @gertjanjeunen @MicaelaHellstr1 😇 Excited to seeing old friends again and making new ones!

Are you a person or institution who uses #DNABarcoding or #metabarcoding in your work? We want to be introduced and grow our network! Reply to this thread and tell us a little about your 🧬 research/ methods/ goals. #Community #Biodiversity #Science

#eDNA #metabarcoding people: anyone looking for a short-term contract who could help us @NatureMetrics write up some research papers? We have loads of great data & projects to get out there, and so very little time! DM me for details #academicwriting #data #science

We preprinted our manuscript on @nanopore #eDNA #metabarcoding. Including a universal primerset for a 2kb region of the 12s-16s rRNA genes of fish mitochondria, and the Decona processing pipeline. Co-first authored by @KDoorenspleet @Lara_Jnsn @SaskiaO13

#eDNA Training, from field to Lab with colleagues from the Ivory Coast, Benin and Senegal. Now ready to apply #barcoding, #metabarcoding, and #metagenomic for #conservation and #Biotechnology.

Non-destructive genomics from museum collections?🫙🧬 A new MER study by @erin_e_hahn & colleagues show the promises and limitations of recovering vertebrate DNA from specimen preservation media using #metabarcoding & shotgun sequencing. @WileyEcology 1/2

JOB ALERT! Please retweet! We're looking for a postdoc @Cornell to use #metabarcoding and #metagenomics to examine what wild-caught fish get used in feeds to fuel global #aquaculture, and help make production more sustainable 🧬🐟🐠🐡🧬 #postdocjobs

🚨 Job Alert! 🚨 Naturalis is hiring two tenure-track researchers. We're looking for experts who want to integrate molecular techniques, imaging, and data science (AI) to advance species recognition and detection. Apply here: #Biodiversity #metabarcoding

1008 community DNA samples waiting @unidue Fresh #coronadelayed BF3/BR2 primers just arrived ✅ Now only 2️⃣ days left for the full job. 1000s of PCRs + validation. Ambitious plan. Challenge accepted 😬👍🏾 Go #leeselab team & FxP robot. 🙏 to thermocycler donators @BiodiversityUDE

2000 #Metabarcoding PCRs done in 24hrs. So far very good success. Go Dominik & Marie #SCANDNAnet @sykemeissner @VascoElbrecht @ampelinus @norwbol @DNAquaNet

Our new paper comparing the performance of primer sets for fish #eDNA #metabarcoding is finally out in Methods in Ecology and Evolution. Two years of efforts to get convinced that @mum_usagi's MiFish 12S primers outperform any possible COI primer for fish eDNA.

A first attempt to map the #eDNA and #metabarcoding community on Twitter. 404 accounts selected by keyword search, 13551 (symmetric) follow links. Here is a high resolution version:

🧬DNA #metabarcoding identifies over 133 #plant species from 54 families comprising the diet of 15 #mammal species in a highly biodiverse Lebanese forest in the Eastern Mediterranean. 🔓Study: #Wildlife #Conservation #Biodiversity

#DarkFungalTaxa are the focus of a new study based on the UNITE database. #Metabarcoding discovers myriads of species that cannot be named under the current International Code of Nomenclature and remain overlooked by conservation biologists.

Our meta-analysis lead by #MaryMcElroy showing that #eDNA #metabarcoding of fish communities is robust compared with conventional methods.

Want to use phylogeny to assess your #eDNA? Read no further: Long #metabarcoding (with @pacbio) of the eukaryotic rDNA operon to phylogenetically and taxonomically resolve environmental diversity. With @JamyMahwash @endomyxan @AlexisCompBio lab

we have been progressing #nemabiome resources and our new paper is out : a set of new nematode rRNA cistron databases and a primer assessment tool to enable more flexible and comprehensive #metabarcoding Great work by @Eleonore_Charr & team! 1/4. see

Super excited to announce that in January we will run a 3-day Workshop on #eDNA #Metabarcoding in #fisheries with @owenwangensteen and @stefanako71 for @FishOceansCAN #MJOLNIR #rstats

More inclusive and now fully interactive, here is the new cartography of the #eDNA and #metabarcoding community on Twitter. Thank you for all your feedbacks on the previous version! [looks much better on big screens]

My first manuscript got published in #environmentalDNA.  We present new #metabarcoding #primers for #dinoflagellates and #cyanobacteria. We compared them with published primers and tested them on #sedaDNA samples. #phytoark #phytoplankton