#Transcriptomic

#Transcriptomic #meta-analysis of #immunecells in #chronicpain conditions identified genes and sex-specific signatures in this new study from Perez & Tawflig

Two sides of the same coin New #CardiovascularResearch study identifies key #transcriptomic changes & altered pulmonary endothelial cross-talk in #COVID-19 and idiopathic pulmonary #fibrosis @CVR_TomaszGuzik @DrMikeDrozd @glenpyle #CVD #SARSCoV2 #ECs

Parasites have memory? 🚨 Our #preprint on bioRxiv explores how #epigenetic regulation shapes #transcriptomic plasticity in #Plasmodium homocircumflexum! 🧬🦠 Instead of random adaptation, gene expression follows a fascinating transition over time. 👀👇

💡#LastestPaper 📚Morphometric Inverse Divergence Networks Combined with HYDRA Identify #Parkinson’s Disease Subtypes with Distinct #Transcriptomic and Serum #Biomarker Profiles 🧑‍🔬by Maria Giovanna Bianco, et al 🔗 #OpenAccess #MDPIIJMS

With the development of #transcriptomic technologies that profile #geneexpression in situ with spatial context, it is now possible to evaluate the utility of #RNA or protein expression signatures for #tumor samples with varying hetero... @nanostringtech

📢New preprint alert: #Benchmarking second-generation methods for cell-type #deconvolution of #transcriptomic data A thread 🧵👇 1/

Using Nanopore sequencing for transciptomic analysis from the Baltic Sea! Looking for Anoxygenic Phototrophs and Diazotrophs. @nordcee #Nanopore #transcriptomic #sequencing #balticsea

Webinar (June 3, 8am PDT) on using single-cell to better understand complex biology. If you're new to the field or already an expert, there’ll be a little of something for everyone. Free registration link: #singlecell #research #transcriptomic #omics

Introducing the Human Aging Endothelial Cell Atlas, a harmonized single-cell #transcriptomic compendium of over 375,000 #EndothelialCells (EC) from 12 human tissues throughout adulthood. 🔗 🗞️ Sarah Dobner, Laura De Rooij, and colleagues used the atlas to identify a p21-associated transcriptional signature linked to EC senescence, which they confirmed both in vitro and in vivo.

New this week in @NatureComms! 🚨 Drs. @KaraQuaid and Ting Wang (@twang5) created a comprehensive resource of high-quality genomic, epigenomic, and #transcriptomic data from #iPSC lines and three iPSC-derived cell types. 🕶️ Check it out:

Single-Nucleus #Transcriptomic #Atlas Reveals Disease-Associated Cellular States in Human #Glomerular Diseases #VisualAbstract by @Cteodosiu

We put together a best practices guide for #ocean sampling, #transcriptomic sequencing, and bioinformatic processing of #protists. There is much to be learned from our single-celled friends🦠 @ariannakrinos @nekton4plankton @robhlampe &SKH @FrontMarineSci

Ecstatic to present our #Spatial #Transcriptomic #VisiumST @10xGenomics data in the #lung of #COVID-19 patients; unveiling by #spatialbiology molecular and cellular features of the lethal cases; a "tour de force" of PhD student @carlosgarciapri

Online today @NatureCVR a large scale #snRNAseq resource shows #transcriptomic changes and alteration in #IntracellularCommunication in patients with #cardiac #hypertrophy caused by #AorticValveStenosis. @DimmelerLab, @LukaNicin, @scell_papers

Parallel Proteomic & Transcriptomic Microenvironment Mapping (μMap) of Nuclear Condensates in Living Cells Journal of the American Chemical Society @dmac68 @MacMillan_Lab @PrincetonChem #Proteomic #Transcriptomic #Mapping #Nuclear #Condensates #LivingCells

It is not a mechanical monster! It is the new addition of the @SingleCell_IJC Unit at @CarrerasIJC: the #Visium CytAssist from @10xGenomics that facilitates transfer of #transcriptomic probes from standard glass slides to enable #spatial #singlecell profiling from #FFPE samples

Out now! The #CRISPR array repair lineage tracing (#CARLIN) mouse line allows for simultaneously analysis of lineage and #transcriptomic information of single #cells in vivo @HSCRB @BostonChildrens

New preprint from my lab w/ @yang_i_li, @JackHumphrey_ & G.Wong: prioritizing #Parkinson’s disease genes using population-scale #transcriptomic data. We implicate innate immune & RNA splicing mechanisms in Parkinson’s disease risk.

Prioritizing Parkinson's Disease genes using population-scale transcriptomic data #biorxiv_genomic

Single-cell #transcriptomic analysis reveals cell type-specific molecular sex differences in #GABAergic neurons, highlighting a connection between sexual #dimorphism at levels of molecules, cells, circuits, and behavior. from the Weizhe Hong lab @UCLA

Subtype-specific #genomic, #transcriptomic and functional analyses of #BreastCancer #BrainMetastases highlight homologous recombination deficiency as a key vulnerability #CancerResearch by @Endoadapt @Nicola_Lady @damirvareslija @RCSI_Irl @NatResCancer