#BioimageAnalysis

My "Introduction to #BioImageAnalysis" slides at #NeubiasPasteur23 are available #openaccess 🔬🖥️🔓

Your #ImageJ Macro takes ages to analyze your images and your graphics card is idle? Learn how to speed up your #BioImageAnalysis macro and how to use #clij in this chapter I happily wrote together with @happifocus 😃🔬🖥️🚀

If you want to learn about #bioimageanalysis I've written a free & open textbook that tries to help: Thanks to the wonder of @ExecutableBooks & other modern magic it's not quite like a normal book... (thread) @OpenEdEdinburgh @NEUBIAS_COST @BioimagingNA

Preparing the @cziscience @napari_imaging #plugin kick-off meeting 😃 The ImageJ Macro Recorder taught thousands of biologists programming macros. I hope the [#clesperanto]-Assistant and the Script Editor will teach thousands of biologists #BioImageAnalysis with #Python 🔬🖥️🎓💪

Friends with @FijiSc and curious about @QuPath? My #i2k2022 video tries to explain the similarities, differences & how they can complement one another: #bioimageanalysis #digitalpathology #opensource

My first online #BioImageAnalysis lecture at the @BIOTEC_TUD in collaboration with @csbdresden and @mpicbg #OpenKnowledge #OpenScience🎓 It covers basics and an introduction to @FijiSc Stay tuned, I'll add lessons weekly 🥳 Enjoy!

My third online #BioImageAnalysis lecture at @BIOTEC_TUD is about #FeatureExtraction and gives an introduction to #ImageJ macro programming including variables and operators, macro recording, conditional statements and loops

My slides about "Challenges and Opportunities for #BioImageAnalysis Core-Facilities" at the @DBioimaging Stakeholder Meeting #openAccess 🔬🖥️🔓 Big thanks @JonSporring et al for having me! 😃

Gladly announcing: I'll join @PoLDresden as group leader for #BioImageAnalysis TechDev🥳 Together with biologists and physicists, we will dive into lakes of voxels, take off into the cloud, make 🔬 smarter, heat up GPUs, and untangle the Physics of Life😃 I'm so looking forward!

#preprint🚨 Overwhelmed when choosing #BioImageAnalysis software? Read our Hitchhiker's Guide🥾 Feedback❤️ly welcome! Big thanks to the team😃@mycroscopy @david_legland @mdoube @SuperResoluSian Ilya Belevich @EJokitalo Martin Schorb @ahklemm @tischitischer

Bio-image analysis job opportunity in Montpellier #Job #bioimageanalysis #imageanalysis #programming #microscopy #fiji #imagej #napari #python #macros #machinelearning #deeplearning #jobopportunity #jobopening #montpellier #biocampus #cnrsinsolite

Never click on "Apply" when changing brightness/contrast in #ImageJ/@FijiSc if you plan to analyze intensities in your images scientifically. It screws up the intensity distribution and this may lead to wrong conclusions. #BioImageAnalysis #TipOfTheDay

Dear fans of #GPUaccelerated #BioImageAnalysis in @FijiSc, It's my pleasure to announce that #clij 2.5.0.0-BETA is out for testing🥳 I need your help! Please help testing the new features so that we can safely release the update to everyone mid June.THX🙏

I made a #BioImageAnalysis #GPT 🎉

1/ 🚀 Excited to release: napari-mcp - agentic control of napari from any MCP-capable AI assistant! Use it for interactive image processing, analysis, and visualisation! Really cool project from @ilan_theodoro in my team! #napari #bioimageanalysis #MCP @biohub

I just released a little @napari_imaging #plugin for simplifying my life and maybe also of others who like click-and-run #BioImageAnalysis: "napari-segment-blobs-and-things-with-membranes"😌 Feedback 💚welcome 😃

You can now #AI-generate entire Juypter Notebooks for your #BioImageAnalysis tasks with the new release 0.15.0 of #biabob 🔬🖥️🗒️🎉 pip install bia-bob==0.15.0 As usual, feedback 💚ly welcome!

It's a wrap!I had a blast in my first semester teaching @UniLeipzig / @Sca_DS.AI: Microscopy Research Data/Software Management, #BioImageAnalysis, Napari, #LLMs. All materials are online #openaccess: about 800 PPT slides + 100 Jupyter Notebooks 🖥️🔬🔓🎉

Want to go beyond the Fiji basics and progress to more intermediate/advanced analysis? Apply to the Batch analysis and macro development in ImageJ/Fiji: going beyond the basics #course! 📅24-26 November 2021 👉More info: #bioimageanalysis #fiji #imagej

Dear #BioImageAnalysis community, dear #nerds 🤓, I'm writing you because of this #job ad posted online. I would like to apply to you for working with me in the #BiAPoL @PoLDresden. We have 2 #openpositions for image data scientists with an open mindset.

Excited to share our new paper using explainable #AI to learn models of complex cell behavior -- including cell competition -- which we can apply to image-based drug screening. Check out the paper here: @G_Charras #bioimageanalysis #imagingthefuture