#spatialtranscriptomic

Drop it like its 🔥 ... Hot of the press.. #spatialomics review of all things #computation For pros or new adopters to #spatialtranscriptomic & #spatialproteomic analyses. Our comprehensive guide to software tools currently used in the field.

Fresh out in @Nature, a landmark study defining conserved “spatial ecotypes” across cancers through #spatialtranscriptomic & they can be detected from plasma #cfDNA and predict #immunotherapy response. #Spatialbiology+#AI️️️️+#liquidbiomarker

Fascinating study from prof @ZeminZhangLab from Peking University fresh out in @Nature using both #scrna & #spatialtranscriptomic to decipher cross-tissue multicellular coordination and rewiring in cancer!

Nature research paper: Cross-tissue multicellular coordination and its rewiring in cancer

Researchers from the @unistra discuss the principles & technologies behind #scRNAseq and #spatialtranscriptomic approaches, highlighting the recent discoveries & novel insights these methodologies have yielded in both liver physiology & disease #biology.

Take a look at the August issue cover video: #Spatialtranscriptomic mapping of early hidradenitis suppurativa. This video shows spatial transcriptomic profiling of early-stage #hidradenitissuppurativa skin, using NanoString GeoMx Digital Spatial Profiling, visualizing epithelial and immune compartments across epidermal and dermal layers. Fluorescent morphology markers were used to delineate epithelial cells (panCK), immune cells (CD45), and nuclei (SYTO 13), which are displayed in distinct colors to define spatial regions of interest. The video highlights immune-enriched microenvironments extending into the deep dermis prior to dermal tunnel or fibrosis formation. This work was produced by Drs. Jaehwan Kim (University of California, Davis) and Young In Lee (Yonsei University College of Medicine). @RockefellerUniv @UCDavisHealth @yonseimed #SingleCellRNAseq #DermatologyResearch #dermtwitter #dermatology #dermscience #dermresearch

#MAP2026: #SpatialTranscriptomic analyses identified actionable cellular and molecular #biomarkers, including a 9-gene cell surface signature as potential therapeutic targets in #osteosarcoma, as discussed by @ManuPalmerini . #ESMODailyReporter:

Advice needed: can you distinguish splicing variants by commercial #spatialtranscriptomic (eg visium)? #singlecell #omics

Researchers from @UCalgary performed #spatialtranscriptomic and #singlecell analyses of the mouse and human #glioblastomas #microenvironment to dissect the impact of distinct anatomical regions of brains on GBM.

Are you a PhD interested in pursuing a scientific career on #adultneurogenesis #spatialtranscriptomic in the mouse brain ? You can apply now for a #JuanDeLaCierva posdoctoral grant form @CienciaGob at our lab in @InstitutoCajal @CSIC 🧠🐭 ASAP ⬇️

The latest technical blog from scientists at the Earlham Institute shares some insights, top tips, and a workflow for applying #spatialtranscriptomic technologies to plant tissue. 🔎🌿🧬 ➡️ #PlantScience

Had a great time presenting Lauren Whaley's work at the #AACR26 poster sesson! 'Integrative #SingleNuclei #SpatialTranscriptomic profiling of primary and recurrent human #glioblastoma reveals cell-specific EGFRvIII expression & ANXA1 signaling axis' #GBM 🧬🧠

Enjoying great #BioImageAnalysis science! Super interesting Doctoral dissertation of Andrea Behanova on #ImageAnalysis for #SpatialTranscriptomic and tissue analysis @CBA_UU

Excited to share my latest @JHepatology editorial on this impactful @Nature paper by my good friends @JoeYeong & Prof Liu Lianxin—highlighting Singapore–China collaboration & the power of #spatialtranscriptomic in predicting #HCC #recurrence.

The first in-depth reference map of the uterus to collect both single cell and #spatialtranscriptomic data reveals new insights into the cellular make up of #endometrialcancers and adds to the Human Cell Atlas. Learn more: #uterinecancer

#Singlecell #RNAseq and #spatialtranscriptomic methods reveal cellular heterogeneity previously hidden by #bulksequencing. As these technologies evolve, they enable researchers to focus on rare cell populations and how they influence human health and...

Thrilled to receive the NIH/NIGMS R35 MIRA to support our #bioinformatics work studying subcellular and cellular #spatialtranscriptomic heterogeneity Special thanks to @rajivmccoy for guidance + support from mentors @jtleek, Joel Bader, Mike Miller @JHUBME 🥳🥂 #AcademicChatter

The first in-depth reference map of the uterus to collect both single cell and #spatialtranscriptomic data reveals new insights into the cellular make up of #endometrialcancers and adds to the Human Cell Atlas. Learn more: #uterinecancer

Last week has been the most exciting in our Spatial Genomic Team -at @sangerinstitute , for beta-testing the N-01 @10xGenomics #CytAssist with #Visium FFPE Version2 I’m so grateful and honoured to have actually run our samples in the first model!! 🔬👩🏻‍🔬❤️#spatialtranscriptomic

Our CYGNUS project is developing a powerful new pipeline for the detailed study of diagnostic and archival tissue samples, enabling researchers to explore #SpatialTranscriptomic data 🔬 Discover more at Image by Jamieson Spatial Lab

🧬 Scientists at the Earlham Institute are developing advanced #singlecell and #spatialtranscriptomic approaches to explore gene expression in plant and animal systems, uncovering the mechanisms they use to adapt to challenges. #CellularGenomics